Cohesive properties of the crystalline phases of twenty proteinogenic α-aminoacids from first-principles calculations
文献情報
Ctirad Červinka, Michal Fulem
Cohesive properties (lattice and cohesive energy of the crystal and corresponding sublimation enthalpy) of the complete set of twenty enantiopure anhydrous proteinogenic amino acids are investigated using first-principles calculations. In contrast to neutral amino acid molecules in the vapor phase, all amino acids form crystals in their zwitterionic form. Therefore, reliable ab initio calculations of the proton transfer energy are an indispensable step of such calculations. Simplifying procedures, designed to rationalize the computational cost of the quasi-harmonic approximation, which proves too demanding if performed fully at the given quantum level of theory, are presented and tested. For this purpose, atomic multipoles (up to the quadrupoles) for the amoeba force field are parametrized for all amino acid zwitterions. While the calculated lattice energies of the amino acids range from 235–458 kJ mol−1 in absolute value, the proton transfer energies typically amount to 100–220 kJ mol−1, which translates to sublimation enthalpies ranging from 117–202 kJ mol−1, appreciably exceeding the sublimation enthalpy values common for nonionic molecular crystals. Critically assessed experimental data on sublimation enthalpies are used as a benchmark for comparison of the data calculated in this work. Cohesive properties of most amino acids calculated in this work, combining the PBE-D3(BJ)/PAW and CCSD(T)-F12/aug-cc-pVDZ levels of theory used for predictions of the lattice energies and of the proton transfer energies, respectively, exhibit a reasonable agreement with the experiment. At the same time, this work contains the first published data on cohesive properties for several enantiopure amino acids.
関連文献
Combined experimental and theoretical investigation of the hemi-squaraine/TiO2 interface for dye sensitized solar cells
Giancarlo Cicero, Bruno Camino, Stefano Bianco, Anna Maria Ferrari, Barbara Ballarin, Claudia Barolo
DOI: 10.1039/C3CP50559F
“Benzation” of graphene upon addition of monovalent chemical species
Ivan A. Popov, Yafei Li, Zhongfang Chen, Alexander I. Boldyrev
DOI: 10.1039/C3CP43921F
A novel method for automatic single molecule tracking of blinking molecules at low intensities
Christoph Kölbl, Beate Stempfle
DOI: 10.1039/C3CP44693J
Computational study of the spin-state energies and UV-Visspectra of bis(1,4,7-triazacyclononane) complexes of some first-row transition metal cations
Matija Zlatar, Maja Gruden-Pavlović, Mireia Güell
DOI: 10.1039/C2CP43735J
Electron tunneling from electronically excited states of isolated bisdisulizole-derived trianion chromophores following UV absorption
Marc-Oliver Winghart, Michael Kühn, Andreas-Neil Unterreiner, Thomas J. A. Wolf, Phuong D. Dau, Hong-Tao Liu, Dao-Ling Huang, Lai-Sheng Wang
DOI: 10.1039/C3CP50497B
A statistical approach for analyzing the development of 1H multiple-quantum coherence in solids
Yuuki Mogami, Yasuto Noda, Hiroto Ishikawa, K. Takegoshi
DOI: 10.1039/C3CP43778G
Photoelectrical properties and the electronic structure of Tl1−xIn1−xSnxSe2 (x = 0, 0.1, 0.2, 0.25) single crystalline alloys
G. E. Davydyuk, H. Kamarudin, G. L. Myronchuk, S. P. Danylchuk, A. O. Fedorchuk, L. V. Piskach, M. Yu. Mozolyuk, O. V. Parasyuk
DOI: 10.1039/C3CP50836F
The effect of size on the optical properties of guanine nanostructures: a femtosecond to nanosecond study
Ying Hua, Pascale Changenet-Barret, Thomas Gustavsson, Dimitra Markovitsi
DOI: 10.1039/C3CP00060E
High permeability and salt rejection reverse osmosis by a zeolite nano-membrane
Yilun Liu
DOI: 10.1039/C3CP43854F
Reliable contact fabrication on nanostructured Bi2Te3-based thermoelectric materials
Shien-Ping Feng, Ya-Huei Chang, Jian Yang, Bed Poudel, Bo Yu, Zhifeng Ren, Gang Chen
DOI: 10.1039/C3CP50993A
こちらもおすすめ
2-ブロモ-9,9-ジフェニル-9H-フルオレンの主な用途は何ですか?
2-溴-9,9-二苯基芴は、医薬品、工業材料、有機合成の研究分野で応用されます。特に、レーザー材料や機能性ポリマーの合成に使用されることがあります。また、蛍光色...
四氯化铱の市場動向や研究トレンドはどうですか?
四氯化铱の市場は研究開発分野で注目されており、特にナノ技術や金属有機框架(MOFs)の分野での需要が増加傾向にあります。価格は安定しており、中国や韓国での生産が...
1-(4-溴-3-氟苯基)-2-氯乙酮を含む廃棄物はどのように処理すべきですか?
1-(4-溴-3-氟苯基)-2-氯乙酮 (CAS番号: 1260857-14-4) の廃棄物は専門的な廃棄処理が必要です。まず、廃棄物は密閉された容器に収集し、...
苦参酚Kとは何ですか?
苦参酚Kは、CAS番号101236-49-1を持つ化合物で、主に天然由来の生薬から抽出されます。この化合物は、抗炎症作用や抗癌作用を持つことが報告されています。
POTASSIUM (1-(TERTBUTOXYCARBONYL)AZETIDIN-3-YL)TRIFLUOROBORATE を含む廃棄物はどのように処理すべきですか?
POTASSIUM (1-(TERTBUTOXYCARBONYL)AZETIDIN-3-YL)TRIFLUOROBORATE を含む廃棄物は、まず安全なエント...
4-庚基-4’-联苯羧酸の市場動向や研究トレンドはどうですか?
4-庚基-4’-聯苯羧酸は、特殊化学品や合成化学の分野で用いられる化学物質ですが、市場動向としては、研究開発の進展とともに需要が増加しています。また、環境配慮型...
6-ブロモ-3-メトキシ-1-フェニル-1H-インドゾールを含む廃棄物はどのように処理すべきですか?
6-ブロモ-3-メトキシ-1-フェニル-1H-インドゾールを含む廃棄物は、適切な化学廃棄処理が必要です。通常、廃棄物は密閉容器に収集され、専門の廃棄処理業者に引...
4,4-二甲基-2-吡咯烷酮はどの業界で使用されていますか?
4,4-二甲基-2-吡咯烷酮は医薬、ポリマー、センサー、半導体などの業界で広く使用されています。特に溶媒としての性能が高く評価されています。
掲載誌
Physical Chemistry Chemical Physics

Physical Chemistry Chemical Physics (PCCP) is an international journal co-owned by 19 physical chemistry and physics societies from around the world. This journal publishes original, cutting-edge research in physical chemistry, chemical physics and biophysical chemistry. To be suitable for publication in PCCP, articles must include significant innovation and/or insight into physical chemistry; this is the most important criterion that reviewers and Editors will judge against when evaluating submissions. The journal has a broad scope and welcomes contributions spanning experiment, theory, computation and data science. Topical coverage includes spectroscopy, dynamics, kinetics, statistical mechanics, thermodynamics, electrochemistry, catalysis, surface science, quantum mechanics, quantum computing and machine learning. Interdisciplinary research areas such as polymers and soft matter, materials, nanoscience, energy, surfaces/interfaces, and biophysical chemistry are welcomed if they demonstrate significant innovation and/or insight into physical chemistry. Joined experimental/theoretical studies are particularly appreciated when complementary and based on up-to-date approaches.













![N-[(Benzyloxy)carbonyl]serine structure N-[(Benzyloxy)carbonyl]serine structure](https://static.chemtradehub.com/structs/276/2768-56-1-77f7.webp)
![[4-(Heptyloxy)phenyl]boronic acid structure [4-(Heptyloxy)phenyl]boronic acid structure](https://static.chemtradehub.com/structs/136/136370-19-9-ad33.webp)