Ab initio static and molecular dynamics study of the absorption spectra of the 4-styrylpyridine photoswitch in its cis and trans forms
文献情報
Latévi Max Lawson Daku, Jorge Linares, Marie-Laure Boillot
We report a thorough investigation of the absorption spectra of the cis and trans isomers of the 4-styrylpyridine photoswitch based on TDDFT calculations. The spectra of both isomers were analysed first from the results of excitation calculations performed on their optimised geometries. The main absorption band of the cis isomer is thus predicted to be due to the S0 → S1 and S0 → S2 transitions, while the main absorption band of the trans isomer is predicted to originate exclusively from the S0 → S1 transition. The convolution of the calculated oscillator strengths with Gaussians helped mimic the broadening of the electronic transitions. However, it proved necessary to use Gaussians with a large full width at half maximum of 5000 cm−1; and, compared to experiment, the calculated main absorption bands of the two isomers are significantly red-shifted and far too symmetric. Consequently, as required for the detailed analysis of the finite-temperature absorption spectrum of a molecule as flexible as 4-styrylpyridine, the influence of the thermal fluctuations has been taken into account by calculating the spectra as time averages over Car–Parrinello molecular dynamics trajectories. For both isomers, this led to a noticeable improvement in the relative positions of the calculated and experimental main absorption bands, and the asymmetry of the calculated bands brings them in better agreement with the experimental ones. Furthermore, these last results show that, actually, the S0 → S1 and S0 → S2 transitions both contribute significantly to the finite-temperature main absorption bands of the two isomers. Finally, in order to also take the vibrational broadening into account, the Franck–Condon factors of the relevant vibrations were calculated within the displaced harmonic oscillator approximation. By thus taking both the thermal and the vibrational broadening into account for the calculation of the absorption bands, the agreement between experiment and theory could be further improved.
おすすめジャーナル

Angewandte Chemie International Edition

Foundations of Chemistry

Journal of Enzyme inhibition and Medicinal Chemistry

Physical Chemistry Chemical Physics

Lab on a Chip

Photochemical & Photobiological Sciences

European Journal of Organic Chemistry

Advanced Engineering Materials

Current Pharmaceutical Biotechnology

Faraday Discussions
関連文献
Fabrication of paper devices via laser-heating-wax-printing for high-tech enzyme-linked immunosorbent assays with low-tech pen-type pH meter readout
Shangwang Le, Hui Zhou, Jinfang Nie, Chaohong Cao, Jiani Yang, Hongcheng Pan, Jianping Li, Yun Zhang
DOI: 10.1039/C6AN02422J
Label-free monitoring of tissue biochemistry following traumatic brain injury using Raman spectroscopy
Francesca Pischiutta, Elisa R. Zanier, Ari Ercole
DOI: 10.1039/C6AN02238C
Real time detection of the nerve agent simulant diethylchlorophosphate by nonfluorophoric small molecules generating a cyclization-induced fluorogenic response
Syed Samim Ali, Ankita Gangopadhyay, Ajoy Kumar Pramanik, Sandip Kumar Samanta, Uday Narayan Guria, Srimanta Manna, Ajit Kumar Mahapatra
DOI: 10.1039/C8AN01012A
2D analysis of polydisperse core–shell nanoparticles using analytical ultracentrifugation
Gary Gorbet, Borries Demeler
DOI: 10.1039/C6AN02236G
Detection of evoked acetylcholine release in mouse brain slices
R. Asri, B. O'Neill, J. C. Patel, K. A. Siletti, M. E. Rice
DOI: 10.1039/C6AN01758D
Development of a functional point-of-need diagnostic for myeloperoxidase detection to identify neutrophilic bronchitis
Michael G. Wolfe, Qiang Zhang, Christy Hui, Katherine Radford, Parameswaran Nair, John D. Brennan
DOI: 10.1039/C6AN01563H
こちらもおすすめ
4-アミノフェノール酸ナトリウム水和物とは何ですか?
4-アミノフェノール酸ナトリウム水和物は、CAS番号206557-08-6の化合物で、4-アミノフェノールとナトリウムが結合した塩と水和物です。この化合物は、白...
Methyl 3-methyl-N-{[(2-methyl-2-propanyl)oxy]carbonyl}-L-histidinateの代替品はありますか?
この化合物は特定の合成プロセスに使用される可能性がありますが、代替品として、他の类似的な化合物、例えばMethyl 3-methyl-N-{[(2-methyl...
4-Boc-2-哌嗪甲酸の市場動向や研究トレンドはどうですか?
4-Boc-2-哌嗪甲酸は、薬品開発や合成化学分野で広く使用されており、その需要は継続的に推移しています。特に、新薬開発における合成化学分野での需要が高まってい...
4,4'-二羟甲基联苯の物理化学的性質は何ですか?
4,4'-二羟甲基联苯のCAS番号は1667-12-5です。この化合物は白色の結晶粉末で、分子量は154.20です。水にわずかに溶けますが、アルコールや有機溶媒...
5-甲硫基戊腈はどの業界で使用されていますか?
5-甲硫基戊腈は医薬品産業で使用される可能性があります。また、ポリマー合成の触媒として、センサー製造の一部として、半導体製造のプロセス改善に使用される可能性があ...
CAS番号1311961-50-8の化合物はどのように合成されますか?
この化合物は、1-abieta-8,11,13-trien-19-イルと6'-メトキシシンコナナン-9-基を含有する窒素含有化合物から合成されます。一般的な合成...
6-ブロモベンジジミダゾール-2-カルビルデオキシドはどのように保存すればよいですか?
6-ブロモベンジジミダゾール-2-カルビルデオキシドは、避光・乾燥した容器(密閉容器)で-20℃~4℃の低温で保存してください。高温や直射日光、湿気は避けてくだ...
Boc-N-甲基氨甲环酸とは何ですか?
621-65-8のCAS番号を持つBoc-N-甲基氨甲环酸は、化学式C7H13NO5を有する化合物です。この化合物は白色の結晶性粉末で、吸湿性があります。
乙基三氟硼酸钾はどのように合成されますか?
乙基三氟硼酸钾は、トリフLUオール酸カリウムとエチルブロミドを反応させて合成されます。この反応は高い選択性と収率を持ち、触媒を用いることで効率的に進行します。
2-フロウロ-5-クロロ-4-アミノフェノールはどのように保存すればよいですか?
2-フロウロ-5-クロロ-4-アミノフェノールは、直射日光を避けて冷却された暗所で保存し、密閉容器に保管してください。温度は常温か低温が適しています。
掲載誌
Physical Chemistry Chemical Physics

Physical Chemistry Chemical Physics (PCCP) is an international journal co-owned by 19 physical chemistry and physics societies from around the world. This journal publishes original, cutting-edge research in physical chemistry, chemical physics and biophysical chemistry. To be suitable for publication in PCCP, articles must include significant innovation and/or insight into physical chemistry; this is the most important criterion that reviewers and Editors will judge against when evaluating submissions. The journal has a broad scope and welcomes contributions spanning experiment, theory, computation and data science. Topical coverage includes spectroscopy, dynamics, kinetics, statistical mechanics, thermodynamics, electrochemistry, catalysis, surface science, quantum mechanics, quantum computing and machine learning. Interdisciplinary research areas such as polymers and soft matter, materials, nanoscience, energy, surfaces/interfaces, and biophysical chemistry are welcomed if they demonstrate significant innovation and/or insight into physical chemistry. Joined experimental/theoretical studies are particularly appreciated when complementary and based on up-to-date approaches.




![(4aR,5S,6R,8aS)-5-[2-(3-Furyl)ethyl]-8a-(hydroxymethyl)-5,6-dimethyl-3,4,4a,5,6,7,8,8a-octahydro-1-naphthalenecarboxylic acid structure (4aR,5S,6R,8aS)-5-[2-(3-Furyl)ethyl]-8a-(hydroxymethyl)-5,6-dimethyl-3,4,4a,5,6,7,8,8a-octahydro-1-naphthalenecarboxylic acid structure](https://static.chemtradehub.com/structs/184/18411-75-1-d4cd.webp)